Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.83□□□□□ -0.52
FAM3BP58499 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 PTCHD3P3-201ENST00000403073 906 ntBASIC11.83□□□□□ -0.52
FAM3BP58499 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.83□□□□□ -0.52
FAM3BP58499 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.83□□□□□ -0.52
FAM3BP58499 AP006288.1-201ENST00000446065 395 ntBASIC11.83□□□□□ -0.52
FAM3BP58499 AC093724.1-201ENST00000448659 1027 ntBASIC11.83□□□□□ -0.52
FAM3BP58499 AC092183.1-201ENST00000469884 875 ntBASIC11.83□□□□□ -0.52
FAM3BP58499 AC112482.1-201ENST00000492080 688 ntBASIC11.83□□□□□ -0.52
FAM3BP58499 AC107918.2-201ENST00000530817 355 ntBASIC11.83□□□□□ -0.52
FAM3BP58499 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 AC004790.2-201ENST00000623588 572 ntBASIC11.83□□□□□ -0.52
FAM3BP58499 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 AC114271.1-201ENST00000612689 2813 ntBASIC11.83□□□□□ -0.52
FAM3BP58499 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.83□□□□□ -0.52
FAM3BP58499 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
FAM3BP58499 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
FAM3BP58499 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
FAM3BP58499 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
FAM3BP58499 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 AC055811.4-201ENST00000624039 1754 ntBASIC11.82□□□□□ -0.52
FAM3BP58499 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
FAM3BP58499 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.82□□□□□ -0.52
FAM3BP58499 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.82□□□□□ -0.52
FAM3BP58499 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.82□□□□□ -0.52
FAM3BP58499 AC211486.1-202ENST00000416371 468 ntBASIC11.82□□□□□ -0.52
FAM3BP58499 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.82□□□□□ -0.52
FAM3BP58499 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.82□□□□□ -0.52
FAM3BP58499 AC211476.1-201ENST00000503899 468 ntBASIC11.82□□□□□ -0.52
FAM3BP58499 YBX1P5-201ENST00000509441 847 ntBASIC11.82□□□□□ -0.52
FAM3BP58499 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.82□□□□□ -0.52
FAM3BP58499 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.82□□□□□ -0.52
FAM3BP58499 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.82□□□□□ -0.52
FAM3BP58499 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.82□□□□□ -0.52
FAM3BP58499 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.82□□□□□ -0.52
FAM3BP58499 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.82□□□□□ -0.52
FAM3BP58499 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.82□□□□□ -0.52
FAM3BP58499 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
FAM3BP58499 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms