Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN20P56880 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 OR2I1P-209ENST00000641730 5365 ntBASIC13.86□□□□□ -0.19
CLDN20P56880 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 AC126365.1-201ENST00000578585 1514 ntBASIC13.85□□□□□ -0.19
CLDN20P56880 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN20P56880 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN20P56880 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLDN20P56880 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN20P56880 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 AC107918.4-201ENST00000641966 3141 ntBASIC13.85□□□□□ -0.19
CLDN20P56880 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLDN20P56880 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 U91328.1-201ENST00000437528 223 ntBASIC13.85□□□□□ -0.19
CLDN20P56880 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN20P56880 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN20P56880 AC093433.1-201ENST00000458048 571 ntBASIC13.85□□□□□ -0.19
CLDN20P56880 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN20P56880 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN20P56880 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 AP001063.1-201ENST00000568332 529 ntBASIC13.85□□□□□ -0.19
CLDN20P56880 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN20P56880 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN20P56880 AC015936.2-201ENST00000593177 259 ntBASIC13.85□□□□□ -0.19
CLDN20P56880 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.85□□□□□ -0.19
CLDN20P56880 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLDN20P56880 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN20P56880 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN20P56880 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN20P56880 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 CICP20-201ENST00000443330 2801 ntBASIC13.84□□□□□ -0.19
CLDN20P56880 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN20P56880 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN20P56880 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN20P56880 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CLDN20P56880 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CLDN20P56880 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN20P56880 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN20P56880 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN20P56880 USP32P1-208ENST00000506594 1164 ntBASIC13.84□□□□□ -0.19
CLDN20P56880 AC009486.1-201ENST00000569860 813 ntBASIC13.84□□□□□ -0.19
CLDN20P56880 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms