Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH13P55290 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CDH13P55290 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH13P55290 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.77□□□□□ -0.05
CDH13P55290 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH13P55290 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH13P55290 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 VDAC1P7-201ENST00000462417 847 ntBASIC14.77□□□□□ -0.05
CDH13P55290 RN7SL399P-201ENST00000471648 279 ntBASIC14.77□□□□□ -0.05
CDH13P55290 AC026410.3-201ENST00000514280 936 ntBASIC14.77□□□□□ -0.05
CDH13P55290 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.77□□□□□ -0.05
CDH13P55290 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH13P55290 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH13P55290 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.77□□□□□ -0.05
CDH13P55290 AC023310.3-201ENST00000557027 670 ntBASIC14.77□□□□□ -0.05
CDH13P55290 AC100756.1-201ENST00000562736 682 ntBASIC14.77□□□□□ -0.05
CDH13P55290 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH13P55290 AC138749.3-201ENST00000567691 622 ntBASIC14.77□□□□□ -0.05
CDH13P55290 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH13P55290 AL049840.4-201ENST00000602422 811 ntBASIC14.77□□□□□ -0.05
CDH13P55290 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH13P55290 AL390955.2-201ENST00000603032 514 ntBASIC14.77□□□□□ -0.05
CDH13P55290 AC116165.1-201ENST00000611806 668 ntBASIC14.77□□□□□ -0.05
CDH13P55290 AL662799.1-202ENST00000614205 422 ntBASIC14.77□□□□□ -0.05
CDH13P55290 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH13P55290 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CDH13P55290 AC006504.5-208ENST00000588784 2401 ntBASIC14.77□□□□□ -0.05
CDH13P55290 AL928921.2-201ENST00000641325 2442 ntBASIC14.77□□□□□ -0.05
CDH13P55290 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 AC041040.2-201ENST00000622926 2899 ntBASIC14.77□□□□□ -0.05
CDH13P55290 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH13P55290 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CDH13P55290 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH13P55290 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH13P55290 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 AC067750.1-201ENST00000608826 6545 ntBASIC14.76□□□□□ -0.05
CDH13P55290 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CDH13P55290 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDH13P55290 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CDH13P55290 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.76□□□□□ -0.05
CDH13P55290 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CDH13P55290 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.76□□□□□ -0.05
CDH13P55290 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 AC139530.3-201ENST00000620344 690 ntBASIC14.76□□□□□ -0.05
CDH13P55290 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH13P55290 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDH13P55290 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH13P55290 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
CDH13P55290 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH13P55290 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDH13P55290 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH13P55290 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDH13P55290 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms