Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 AC136759.1-202ENST00000530858 2194 ntBASIC16.55■□□□□ 0.24
PMS1P54277 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.55■□□□□ 0.24
PMS1P54277 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.55■□□□□ 0.24
PMS1P54277 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.54■□□□□ 0.24
PMS1P54277 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PMS1P54277 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PMS1P54277 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.54■□□□□ 0.24
PMS1P54277 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.54■□□□□ 0.24
PMS1P54277 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.54■□□□□ 0.24
PMS1P54277 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.54■□□□□ 0.24
PMS1P54277 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PMS1P54277 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.54■□□□□ 0.24
PMS1P54277 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.54■□□□□ 0.24
PMS1P54277 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.54■□□□□ 0.24
PMS1P54277 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 GIMAP3P-201ENST00000495150 836 ntBASIC16.54■□□□□ 0.24
PMS1P54277 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.54■□□□□ 0.24
PMS1P54277 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.54■□□□□ 0.24
PMS1P54277 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PMS1P54277 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.54■□□□□ 0.24
PMS1P54277 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.54■□□□□ 0.24
PMS1P54277 AP005019.2-201ENST00000615104 511 ntBASIC16.54■□□□□ 0.24
PMS1P54277 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.54■□□□□ 0.24
PMS1P54277 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PMS1P54277 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.54■□□□□ 0.24
PMS1P54277 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.54■□□□□ 0.24
PMS1P54277 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PMS1P54277 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PMS1P54277 GRK6P1-201ENST00000400595 1711 ntBASIC16.53■□□□□ 0.24
PMS1P54277 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PMS1P54277 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.53■□□□□ 0.24
PMS1P54277 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PMS1P54277 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 ACTBP8-201ENST00000403258 1108 ntBASIC16.53■□□□□ 0.24
PMS1P54277 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
PMS1P54277 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.53■□□□□ 0.24
PMS1P54277 AC093433.1-201ENST00000458048 571 ntBASIC16.53■□□□□ 0.24
PMS1P54277 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.53■□□□□ 0.24
PMS1P54277 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PMS1P54277 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.53■□□□□ 0.24
PMS1P54277 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.53■□□□□ 0.24
PMS1P54277 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.53■□□□□ 0.24
PMS1P54277 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PMS1P54277 RPSAP52-203ENST00000622976 1023 ntBASIC16.53■□□□□ 0.24
PMS1P54277 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.53■□□□□ 0.24
PMS1P54277 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PMS1P54277 AC126755.1-201ENST00000525846 6405 ntBASIC16.53■□□□□ 0.24
PMS1P54277 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PMS1P54277 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 AC003102.2-201ENST00000589195 1469 ntBASIC16.53■□□□□ 0.24
PMS1P54277 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PMS1P54277 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.53■□□□□ 0.24
PMS1P54277 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PMS1P54277 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PMS1P54277 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 AC012617.1-204ENST00000586340 2305 ntBASIC16.52■□□□□ 0.24
PMS1P54277 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.52■□□□□ 0.24
PMS1P54277 AC068587.6-202ENST00000641839 5619 ntBASIC16.52■□□□□ 0.24
PMS1P54277 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
PMS1P54277 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms