Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-5P52952 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NKX2-5P52952 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-5P52952 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-5P52952 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-5P52952 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-5P52952 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-5P52952 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-5P52952 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-5P52952 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-5P52952 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-5P52952 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NKX2-5P52952 MKRN5P-201ENST00000445263 1467 ntBASIC12.78□□□□□ -0.36
NKX2-5P52952 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NKX2-5P52952 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 AC084364.1-201ENST00000551967 1556 ntBASIC12.78□□□□□ -0.36
NKX2-5P52952 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 AC090643.2-201ENST00000623442 2029 ntBASIC12.78□□□□□ -0.36
NKX2-5P52952 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-5P52952 FAM8A6P-201ENST00000407496 1135 ntBASIC12.78□□□□□ -0.36
NKX2-5P52952 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX2-5P52952 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.78□□□□□ -0.36
NKX2-5P52952 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX2-5P52952 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
NKX2-5P52952 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
NKX2-5P52952 AL512604.3-201ENST00000569583 964 ntBASIC12.78□□□□□ -0.36
NKX2-5P52952 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.78□□□□□ -0.36
NKX2-5P52952 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.78□□□□□ -0.36
NKX2-5P52952 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
NKX2-5P52952 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-5P52952 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 AC092139.4-201ENST00000624318 2794 ntBASIC12.78□□□□□ -0.36
NKX2-5P52952 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX2-5P52952 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 TP73-AS1-210ENST00000637775 1455 ntBASIC12.78□□□□□ -0.36
NKX2-5P52952 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 AC099521.2-201ENST00000619354 2036 ntBASIC12.78□□□□□ -0.36
NKX2-5P52952 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-5P52952 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-5P52952 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-5P52952 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-5P52952 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-5P52952 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-5P52952 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-5P52952 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.77□□□□□ -0.37
NKX2-5P52952 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-5P52952 AC092597.1-201ENST00000487352 616 ntBASIC12.77□□□□□ -0.37
NKX2-5P52952 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-5P52952 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 C2orf69P3-201ENST00000565542 1120 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms