Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.19□□□□□ -0.14
SMSP52788 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SMSP52788 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 AC245100.3-201ENST00000441281 285 ntBASIC14.19□□□□□ -0.14
SMSP52788 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.19□□□□□ -0.14
SMSP52788 KLF2P4-201ENST00000451959 1225 ntBASIC14.19□□□□□ -0.14
SMSP52788 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 RN7SL399P-201ENST00000471648 279 ntBASIC14.19□□□□□ -0.14
SMSP52788 AC119751.2-201ENST00000504529 210 ntBASIC14.19□□□□□ -0.14
SMSP52788 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.19□□□□□ -0.14
SMSP52788 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.19□□□□□ -0.14
SMSP52788 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SMSP52788 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.19□□□□□ -0.14
SMSP52788 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SMSP52788 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.19□□□□□ -0.14
SMSP52788 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.19□□□□□ -0.14
SMSP52788 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.19□□□□□ -0.14
SMSP52788 AL022328.1-201ENST00000610050 478 ntBASIC14.19□□□□□ -0.14
SMSP52788 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMSP52788 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.19□□□□□ -0.14
SMSP52788 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 AL133338.1-201ENST00000565695 1517 ntBASIC14.19□□□□□ -0.14
SMSP52788 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 AC018665.1-201ENST00000622927 1362 ntBASIC14.19□□□□□ -0.14
SMSP52788 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMSP52788 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SMSP52788 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SMSP52788 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.18□□□□□ -0.14
SMSP52788 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 AC084364.1-201ENST00000551967 1556 ntBASIC14.18□□□□□ -0.14
SMSP52788 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.18□□□□□ -0.14
SMSP52788 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.18□□□□□ -0.14
SMSP52788 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SMSP52788 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SMSP52788 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.18□□□□□ -0.14
SMSP52788 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.18□□□□□ -0.14
SMSP52788 CROCCP4-201ENST00000457096 498 ntBASIC14.18□□□□□ -0.14
SMSP52788 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.18□□□□□ -0.14
SMSP52788 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.18□□□□□ -0.14
SMSP52788 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.18□□□□□ -0.14
SMSP52788 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.18□□□□□ -0.14
SMSP52788 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.18□□□□□ -0.14
SMSP52788 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.18□□□□□ -0.14
SMSP52788 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.18□□□□□ -0.14
SMSP52788 AC140479.7-201ENST00000636301 2332 ntBASIC14.18□□□□□ -0.14
SMSP52788 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMSP52788 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMSP52788 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms