Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.82□□□□□ -0.04
GTF2A1P52655 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GTF2A1P52655 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC14.81□□□□□ -0.04
GTF2A1P52655 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
GTF2A1P52655 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.81□□□□□ -0.04
GTF2A1P52655 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 RCN1P2-201ENST00000398357 915 ntBASIC14.81□□□□□ -0.04
GTF2A1P52655 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.81□□□□□ -0.04
GTF2A1P52655 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.81□□□□□ -0.04
GTF2A1P52655 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.81□□□□□ -0.04
GTF2A1P52655 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.81□□□□□ -0.04
GTF2A1P52655 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.81□□□□□ -0.04
GTF2A1P52655 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GTF2A1P52655 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
GTF2A1P52655 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 AC018445.4-201ENST00000624066 2291 ntBASIC14.81□□□□□ -0.04
GTF2A1P52655 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GTF2A1P52655 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GTF2A1P52655 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.81□□□□□ -0.04
GTF2A1P52655 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 GPAA1P2-202ENST00000606848 1787 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GTF2A1P52655 DDX12P-201ENST00000432996 2947 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GTF2A1P52655 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 CHCHD2P8-201ENST00000429873 447 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 AC096582.2-201ENST00000510860 516 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.8□□□□□ -0.04
GTF2A1P52655 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.8□□□□□ -0.04
GTF2A1P52655 AL136038.3-201ENST00000561909 1096 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 BNIP3P18-201ENST00000593976 575 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 TERC-201ENST00000602385 541 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GTF2A1P52655 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms