Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
CENPAP49450 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CENPAP49450 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CENPAP49450 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.77□□□□□ -0.2
CENPAP49450 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CENPAP49450 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CENPAP49450 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CENPAP49450 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CENPAP49450 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CENPAP49450 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CENPAP49450 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.77□□□□□ -0.21
CENPAP49450 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.77□□□□□ -0.21
CENPAP49450 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 TIMM17BP1-201ENST00000545713 516 ntBASIC13.77□□□□□ -0.21
CENPAP49450 AC138969.3-201ENST00000546612 1459 ntBASIC13.77□□□□□ -0.21
CENPAP49450 AC138932.2-201ENST00000548268 1459 ntBASIC13.77□□□□□ -0.21
CENPAP49450 AC126755.4-201ENST00000549796 1459 ntBASIC13.77□□□□□ -0.21
CENPAP49450 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.77□□□□□ -0.21
CENPAP49450 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.77□□□□□ -0.21
CENPAP49450 AC074044.1-201ENST00000609673 707 ntBASIC13.77□□□□□ -0.21
CENPAP49450 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CENPAP49450 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CENPAP49450 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CENPAP49450 AC011700.1-201ENST00000610409 2627 ntBASIC13.77□□□□□ -0.21
CENPAP49450 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.76□□□□□ -0.21
CENPAP49450 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CENPAP49450 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 SDHAP3-202ENST00000515467 728 ntBASIC13.76□□□□□ -0.21
CENPAP49450 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.76□□□□□ -0.21
CENPAP49450 AC025181.2-201ENST00000606994 802 ntBASIC13.76□□□□□ -0.21
CENPAP49450 AC093028.1-201ENST00000622998 982 ntBASIC13.76□□□□□ -0.21
CENPAP49450 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms