Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
NEDD4P46934 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NEDD4P46934 YBX1P6-201ENST00000442962 1002 ntBASIC17.64■□□□□ 0.41
NEDD4P46934 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 AC023310.1-201ENST00000554836 735 ntBASIC17.64■□□□□ 0.41
NEDD4P46934 DUX4L45-201ENST00000566406 1057 ntBASIC17.64■□□□□ 0.41
NEDD4P46934 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.64■□□□□ 0.41
NEDD4P46934 AL033527.4-201ENST00000641026 673 ntBASIC17.64■□□□□ 0.41
NEDD4P46934 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD4P46934 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NEDD4P46934 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.63■□□□□ 0.41
NEDD4P46934 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.63■□□□□ 0.41
NEDD4P46934 AC026748.1-201ENST00000624349 3251 ntBASIC17.63■□□□□ 0.41
NEDD4P46934 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NEDD4P46934 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD4P46934 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.63■□□□□ 0.41
NEDD4P46934 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NEDD4P46934 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD4P46934 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
NEDD4P46934 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.63■□□□□ 0.41
NEDD4P46934 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
NEDD4P46934 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD4P46934 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.63■□□□□ 0.41
NEDD4P46934 RPS2P32-201ENST00000439199 892 ntBASIC17.63■□□□□ 0.41
NEDD4P46934 HIST2H2BB-201ENST00000449108 381 ntBASIC17.63■□□□□ 0.41
NEDD4P46934 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NEDD4P46934 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.63■□□□□ 0.41
NEDD4P46934 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD4P46934 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.63■□□□□ 0.41
NEDD4P46934 GCOM2-201ENST00000509133 1104 ntBASIC17.63■□□□□ 0.41
NEDD4P46934 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 AL583810.1-201ENST00000553344 1045 ntBASIC17.63■□□□□ 0.41
NEDD4P46934 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD4P46934 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD4P46934 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD4P46934 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.63■□□□□ 0.41
NEDD4P46934 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD4P46934 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NEDD4P46934 AL023775.1-201ENST00000454907 1746 ntBASIC17.62■□□□□ 0.41
NEDD4P46934 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NEDD4P46934 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NEDD4P46934 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.62■□□□□ 0.41
NEDD4P46934 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.62■□□□□ 0.41
NEDD4P46934 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.62■□□□□ 0.41
NEDD4P46934 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 AC007274.1-201ENST00000439805 662 ntBASIC17.62■□□□□ 0.41
NEDD4P46934 CHMP1AP1-201ENST00000445563 662 ntBASIC17.62■□□□□ 0.41
NEDD4P46934 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4P46934 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.62■□□□□ 0.41
NEDD4P46934 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.62■□□□□ 0.41
NEDD4P46934 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.62■□□□□ 0.41
NEDD4P46934 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms