Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MTHFRP42898 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MTHFRP42898 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
MTHFRP42898 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MTHFRP42898 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MTHFRP42898 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.7■□□□□ 0.1
MTHFRP42898 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
MTHFRP42898 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.7■□□□□ 0.1
MTHFRP42898 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.7■□□□□ 0.1
MTHFRP42898 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 RCC2P8-201ENST00000502779 1035 ntBASIC15.7■□□□□ 0.1
MTHFRP42898 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.7■□□□□ 0.1
MTHFRP42898 MIR4783-201ENST00000580343 82 ntBASIC15.7■□□□□ 0.1
MTHFRP42898 RN7SL736P-201ENST00000613111 269 ntBASIC15.7■□□□□ 0.1
MTHFRP42898 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MTHFRP42898 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MTHFRP42898 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MTHFRP42898 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
MTHFRP42898 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MTHFRP42898 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.69■□□□□ 0.1
MTHFRP42898 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 AC010141.1-201ENST00000411585 623 ntBASIC15.69■□□□□ 0.1
MTHFRP42898 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.69■□□□□ 0.1
MTHFRP42898 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 RN7SL181P-201ENST00000462921 277 ntBASIC15.69■□□□□ 0.1
MTHFRP42898 AC026434.2-201ENST00000506094 1078 ntBASIC15.69■□□□□ 0.1
MTHFRP42898 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.69■□□□□ 0.1
MTHFRP42898 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.69■□□□□ 0.1
MTHFRP42898 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.69■□□□□ 0.1
MTHFRP42898 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFRP42898 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MTHFRP42898 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 FLJ16779-201ENST00000612722 7638 ntBASIC15.68■□□□□ 0.1
MTHFRP42898 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MTHFRP42898 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms