Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
USP8P40818 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.5■□□□□ 0.23
USP8P40818 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
USP8P40818 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
USP8P40818 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.5■□□□□ 0.23
USP8P40818 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
USP8P40818 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.5■□□□□ 0.23
USP8P40818 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.5■□□□□ 0.23
USP8P40818 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.5■□□□□ 0.23
USP8P40818 RN7SL399P-201ENST00000471648 279 ntBASIC16.5■□□□□ 0.23
USP8P40818 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.5■□□□□ 0.23
USP8P40818 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.5■□□□□ 0.23
USP8P40818 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.5■□□□□ 0.23
USP8P40818 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
USP8P40818 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.5■□□□□ 0.23
USP8P40818 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.5■□□□□ 0.23
USP8P40818 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
USP8P40818 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.5■□□□□ 0.23
USP8P40818 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
USP8P40818 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
USP8P40818 FGD5P1-202ENST00000614866 2498 ntBASIC16.5■□□□□ 0.23
USP8P40818 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP8P40818 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 AC041040.2-201ENST00000622926 2899 ntBASIC16.49■□□□□ 0.23
USP8P40818 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.49■□□□□ 0.23
USP8P40818 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
USP8P40818 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
USP8P40818 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.49■□□□□ 0.23
USP8P40818 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.49■□□□□ 0.23
USP8P40818 SAMD11P1-201ENST00000571429 661 ntBASIC16.49■□□□□ 0.23
USP8P40818 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.49■□□□□ 0.23
USP8P40818 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.49■□□□□ 0.23
USP8P40818 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 AL391069.4-201ENST00000609583 481 ntBASIC16.49■□□□□ 0.23
USP8P40818 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 AC013726.1-201ENST00000563747 2285 ntBASIC16.49■□□□□ 0.23
USP8P40818 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.49■□□□□ 0.23
USP8P40818 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP8P40818 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
USP8P40818 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.48■□□□□ 0.23
USP8P40818 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
USP8P40818 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
USP8P40818 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
USP8P40818 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP8P40818 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
USP8P40818 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms