Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HMGCLP35914 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 AC011840.2-201ENST00000563063 1520 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HMGCLP35914 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGCLP35914 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HMGCLP35914 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCLP35914 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCLP35914 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HMGCLP35914 PCDHA3-202ENST00000532566 4594 ntBASIC14.94□□□□□ -0.02
HMGCLP35914 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCLP35914 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 MIR1909-201ENST00000411312 80 ntBASIC14.94□□□□□ -0.02
HMGCLP35914 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.94□□□□□ -0.02
HMGCLP35914 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.94□□□□□ -0.02
HMGCLP35914 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCLP35914 AL391280.1-201ENST00000506969 1062 ntBASIC14.94□□□□□ -0.02
HMGCLP35914 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.94□□□□□ -0.02
HMGCLP35914 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HMGCLP35914 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
HMGCLP35914 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCLP35914 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.94□□□□□ -0.02
HMGCLP35914 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCLP35914 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
HMGCLP35914 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCLP35914 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
HMGCLP35914 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HMGCLP35914 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HMGCLP35914 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HMGCLP35914 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCLP35914 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HMGCLP35914 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 AC020910.5-201ENST00000623668 1865 ntBASIC14.93□□□□□ -0.02
HMGCLP35914 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCLP35914 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 AL354989.2-201ENST00000435838 1540 ntBASIC14.93□□□□□ -0.02
HMGCLP35914 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HMGCLP35914 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCLP35914 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 RN7SKP175-201ENST00000408472 289 ntBASIC14.93□□□□□ -0.02
HMGCLP35914 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
HMGCLP35914 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.93□□□□□ -0.02
HMGCLP35914 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCLP35914 ALG3P1-201ENST00000508806 1114 ntBASIC14.93□□□□□ -0.02
HMGCLP35914 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.93□□□□□ -0.02
HMGCLP35914 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCLP35914 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HMGCLP35914 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCLP35914 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms