Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC093433.1-201ENST00000458048 571 ntBASIC15.9■□□□□ 0.14
RFC1P35251 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 AP001063.1-201ENST00000568332 529 ntBASIC15.9■□□□□ 0.14
RFC1P35251 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.9■□□□□ 0.14
RFC1P35251 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RFC1P35251 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RFC1P35251 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 AC023908.3-201ENST00000564211 3047 ntBASIC15.89■□□□□ 0.13
RFC1P35251 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC1P35251 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RFC1P35251 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC1P35251 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.89■□□□□ 0.13
RFC1P35251 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC1P35251 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC1P35251 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC1P35251 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC1P35251 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC1P35251 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFC1P35251 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 MSTO2P-201ENST00000314835 1709 ntBASIC15.88■□□□□ 0.13
RFC1P35251 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFC1P35251 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFC1P35251 EIF3FP3-201ENST00000434851 1086 ntBASIC15.88■□□□□ 0.13
RFC1P35251 AC022616.1-201ENST00000518688 554 ntBASIC15.88■□□□□ 0.13
RFC1P35251 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms