Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CKS2P33552 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.13□□□□□ -0.63
CKS2P33552 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 AC022447.6-201ENST00000515522 438 ntBASIC11.13□□□□□ -0.63
CKS2P33552 AF238378.1-201ENST00000526806 358 ntBASIC11.13□□□□□ -0.63
CKS2P33552 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.13□□□□□ -0.63
CKS2P33552 AL138918.1-201ENST00000568306 659 ntBASIC11.13□□□□□ -0.63
CKS2P33552 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.13□□□□□ -0.63
CKS2P33552 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
CKS2P33552 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.12□□□□□ -0.63
CKS2P33552 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.12□□□□□ -0.63
CKS2P33552 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
CKS2P33552 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.12□□□□□ -0.63
CKS2P33552 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.12□□□□□ -0.63
CKS2P33552 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CKS2P33552 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 TSPY19P-201ENST00000418461 509 ntBASIC11.12□□□□□ -0.63
CKS2P33552 TSPY18P-201ENST00000441642 509 ntBASIC11.12□□□□□ -0.63
CKS2P33552 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.12□□□□□ -0.63
CKS2P33552 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.12□□□□□ -0.63
CKS2P33552 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
CKS2P33552 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 AC093458.2-201ENST00000623150 629 ntBASIC11.12□□□□□ -0.63
CKS2P33552 AC117500.6-201ENST00000624871 588 ntBASIC11.12□□□□□ -0.63
CKS2P33552 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
CKS2P33552 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CKS2P33552 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS2P33552 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms