Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.95□□□□□ -0.34
CD40P25942 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.95□□□□□ -0.34
CD40P25942 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 MIR1247-201ENST00000408206 136 ntBASIC12.95□□□□□ -0.34
CD40P25942 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.95□□□□□ -0.34
CD40P25942 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.95□□□□□ -0.34
CD40P25942 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD40P25942 POM121L10P-201ENST00000436994 1285 ntBASIC12.95□□□□□ -0.34
CD40P25942 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40P25942 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.95□□□□□ -0.34
CD40P25942 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 AC100850.1-201ENST00000506768 649 ntBASIC12.95□□□□□ -0.34
CD40P25942 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40P25942 AP001258.2-201ENST00000529891 490 ntBASIC12.95□□□□□ -0.34
CD40P25942 MIR4683-201ENST00000579659 81 ntBASIC12.95□□□□□ -0.34
CD40P25942 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.95□□□□□ -0.34
CD40P25942 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40P25942 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40P25942 AC002472.3-201ENST00000640124 621 ntBASIC12.95□□□□□ -0.34
CD40P25942 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.95□□□□□ -0.34
CD40P25942 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 AL109954.1-202ENST00000564051 2148 ntBASIC12.95□□□□□ -0.34
CD40P25942 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CD40P25942 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 INE2-201ENST00000630399 1874 ntBASIC12.95□□□□□ -0.34
CD40P25942 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40P25942 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40P25942 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CD40P25942 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40P25942 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.95□□□□□ -0.34
CD40P25942 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CD40P25942 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 AL138725.1-201ENST00000407347 1314 ntBASIC12.94□□□□□ -0.34
CD40P25942 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 AC022532.1-201ENST00000624563 1728 ntBASIC12.94□□□□□ -0.34
CD40P25942 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 AC023090.2-201ENST00000625182 2110 ntBASIC12.94□□□□□ -0.34
CD40P25942 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 AC020910.5-201ENST00000623668 1865 ntBASIC12.94□□□□□ -0.34
CD40P25942 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CD40P25942 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 GPAA1P2-201ENST00000417923 928 ntBASIC12.94□□□□□ -0.34
CD40P25942 TLE1P1-201ENST00000422965 589 ntBASIC12.94□□□□□ -0.34
CD40P25942 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 KRT8P13-201ENST00000463294 1010 ntBASIC12.94□□□□□ -0.34
CD40P25942 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.94□□□□□ -0.34
CD40P25942 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.94□□□□□ -0.34
CD40P25942 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.94□□□□□ -0.34
CD40P25942 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.94□□□□□ -0.34
CD40P25942 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.94□□□□□ -0.34
CD40P25942 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CD40P25942 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms