Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 DGCR9-201ENST00000609630 2415 ntBASIC12.66□□□□□ -0.38
LMO1P25800 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
LMO1P25800 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.65□□□□□ -0.38
LMO1P25800 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LMO1P25800 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.65□□□□□ -0.38
LMO1P25800 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.65□□□□□ -0.38
LMO1P25800 MIR661-201ENST00000384842 89 ntBASIC12.65□□□□□ -0.38
LMO1P25800 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
LMO1P25800 PIN1P1-201ENST00000412108 996 ntBASIC12.65□□□□□ -0.38
LMO1P25800 KLF2P2-201ENST00000416807 1039 ntBASIC12.65□□□□□ -0.38
LMO1P25800 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.65□□□□□ -0.38
LMO1P25800 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.65□□□□□ -0.38
LMO1P25800 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.65□□□□□ -0.38
LMO1P25800 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
LMO1P25800 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.65□□□□□ -0.38
LMO1P25800 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LMO1P25800 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LMO1P25800 TCAF1P1-201ENST00000414990 2232 ntBASIC12.65□□□□□ -0.38
LMO1P25800 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.65□□□□□ -0.38
LMO1P25800 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LMO1P25800 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LMO1P25800 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LMO1P25800 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LMO1P25800 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.65□□□□□ -0.39
LMO1P25800 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.65□□□□□ -0.39
LMO1P25800 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.64□□□□□ -0.39
LMO1P25800 AC063926.2-201ENST00000623766 1308 ntBASIC12.64□□□□□ -0.39
LMO1P25800 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LMO1P25800 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LMO1P25800 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LMO1P25800 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 AC027612.1-201ENST00000445234 2395 ntBASIC12.64□□□□□ -0.39
LMO1P25800 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LMO1P25800 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LMO1P25800 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.64□□□□□ -0.39
LMO1P25800 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 RNU1-114P-201ENST00000365297 166 ntBASIC12.64□□□□□ -0.39
LMO1P25800 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.64□□□□□ -0.39
LMO1P25800 ACTBP8-201ENST00000403258 1108 ntBASIC12.64□□□□□ -0.39
LMO1P25800 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
LMO1P25800 AC005034.1-201ENST00000426657 489 ntBASIC12.64□□□□□ -0.39
LMO1P25800 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.64□□□□□ -0.39
LMO1P25800 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.64□□□□□ -0.39
LMO1P25800 ELK1P1-201ENST00000485699 580 ntBASIC12.64□□□□□ -0.39
LMO1P25800 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
LMO1P25800 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.64□□□□□ -0.39
LMO1P25800 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.64□□□□□ -0.39
LMO1P25800 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms