Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ITGA6P23229 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 FAM90A7P-201ENST00000382628 1395 ntBASIC18.36■□□□□ 0.53
ITGA6P23229 FAM90A23P-201ENST00000400136 1395 ntBASIC18.36■□□□□ 0.53
ITGA6P23229 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.36■□□□□ 0.53
ITGA6P23229 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA6P23229 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.36■□□□□ 0.53
ITGA6P23229 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 UPF3AP2-201ENST00000457924 1132 ntBASIC18.36■□□□□ 0.53
ITGA6P23229 IMP3P2-201ENST00000489760 475 ntBASIC18.36■□□□□ 0.53
ITGA6P23229 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.36■□□□□ 0.53
ITGA6P23229 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.36■□□□□ 0.53
ITGA6P23229 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA6P23229 SCARNA21-201ENST00000517026 139 ntBASIC18.36■□□□□ 0.53
ITGA6P23229 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA6P23229 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.36■□□□□ 0.53
ITGA6P23229 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.36■□□□□ 0.53
ITGA6P23229 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA6P23229 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA6P23229 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.36■□□□□ 0.53
ITGA6P23229 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.36■□□□□ 0.53
ITGA6P23229 CU633904.3-201ENST00000624042 1029 ntBASIC18.36■□□□□ 0.53
ITGA6P23229 AC006486.2-201ENST00000624246 2199 ntBASIC18.36■□□□□ 0.53
ITGA6P23229 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.36■□□□□ 0.53
ITGA6P23229 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA6P23229 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ITGA6P23229 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA6P23229 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
ITGA6P23229 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 Z97180.1-201ENST00000445173 988 ntBASIC18.35■□□□□ 0.53
ITGA6P23229 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA6P23229 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA6P23229 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.35■□□□□ 0.53
ITGA6P23229 AC245884.6-201ENST00000515672 1067 ntBASIC18.35■□□□□ 0.53
ITGA6P23229 AC024681.1-201ENST00000521917 487 ntBASIC18.35■□□□□ 0.53
ITGA6P23229 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
ITGA6P23229 AC009779.1-201ENST00000551138 283 ntBASIC18.35■□□□□ 0.53
ITGA6P23229 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA6P23229 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 AL132994.2-201ENST00000603120 687 ntBASIC18.35■□□□□ 0.53
ITGA6P23229 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ITGA6P23229 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA6P23229 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA6P23229 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA6P23229 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA6P23229 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA6P23229 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA6P23229 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.34■□□□□ 0.53
ITGA6P23229 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA6P23229 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ITGA6P23229 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.34■□□□□ 0.53
ITGA6P23229 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.34■□□□□ 0.53
ITGA6P23229 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA6P23229 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.34■□□□□ 0.53
ITGA6P23229 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.34■□□□□ 0.53
ITGA6P23229 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA6P23229 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA6P23229 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ITGA6P23229 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
ITGA6P23229 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
ITGA6P23229 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ITGA6P23229 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA6P23229 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA6P23229 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.34■□□□□ 0.53
ITGA6P23229 AL157407.1-201ENST00000435784 904 ntBASIC18.34■□□□□ 0.53
ITGA6P23229 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.34■□□□□ 0.53
ITGA6P23229 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms