Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
XPAP23025 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
XPAP23025 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.21■□□□□ 0.03
XPAP23025 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
XPAP23025 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
XPAP23025 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
XPAP23025 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
XPAP23025 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
XPAP23025 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
XPAP23025 AC026954.1-201ENST00000429771 1293 ntBASIC15.21■□□□□ 0.03
XPAP23025 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 AC010328.2-201ENST00000597698 1111 ntBASIC15.21■□□□□ 0.03
XPAP23025 AC006453.4-201ENST00000636949 1252 ntBASIC15.21■□□□□ 0.03
XPAP23025 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.21■□□□□ 0.03
XPAP23025 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.21■□□□□ 0.03
XPAP23025 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
XPAP23025 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XPAP23025 LINC00554-201ENST00000564841 3011 ntBASIC15.21■□□□□ 0.02
XPAP23025 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
XPAP23025 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
XPAP23025 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
XPAP23025 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
XPAP23025 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
XPAP23025 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
XPAP23025 MROH4P-201ENST00000431302 1578 ntBASIC15.2■□□□□ 0.02
XPAP23025 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
XPAP23025 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.2■□□□□ 0.02
XPAP23025 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 AC006001.1-201ENST00000325130 474 ntBASIC15.2■□□□□ 0.02
XPAP23025 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.2■□□□□ 0.02
XPAP23025 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
XPAP23025 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.2■□□□□ 0.02
XPAP23025 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 CD8B2-202ENST00000417670 633 ntBASIC15.2■□□□□ 0.02
XPAP23025 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.2■□□□□ 0.02
XPAP23025 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.2■□□□□ 0.02
XPAP23025 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
XPAP23025 FAM8A4P-201ENST00000435433 1213 ntBASIC15.2■□□□□ 0.02
XPAP23025 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.2■□□□□ 0.02
XPAP23025 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.2■□□□□ 0.02
XPAP23025 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.2■□□□□ 0.02
XPAP23025 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.2■□□□□ 0.02
XPAP23025 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.2■□□□□ 0.02
XPAP23025 AC008687.7-202ENST00000637404 953 ntBASIC15.2■□□□□ 0.02
XPAP23025 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.2■□□□□ 0.02
XPAP23025 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.2■□□□□ 0.02
XPAP23025 LILRP1-201ENST00000444199 1370 ntBASIC15.2■□□□□ 0.02
XPAP23025 AP000845.1-201ENST00000581677 2131 ntBASIC15.2■□□□□ 0.02
XPAP23025 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.2■□□□□ 0.02
XPAP23025 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
XPAP23025 AC022532.1-201ENST00000624563 1728 ntBASIC15.2■□□□□ 0.02
XPAP23025 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XPAP23025 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.19■□□□□ 0.02
XPAP23025 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.19■□□□□ 0.02
XPAP23025 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
XPAP23025 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
XPAP23025 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
XPAP23025 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.19■□□□□ 0.02
XPAP23025 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms