Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 AC148477.4-201ENST00000613430 1793 ntBASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 KRT90P-201ENST00000549264 1064 ntBASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 RHOXF1P1-202ENST00000635473 501 ntBASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 REXO1L6P-201ENST00000603433 1515 ntBASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMIGD3P0DMS9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 AC005840.4-201ENST00000541242 2494 ntBASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMIGD3P0DMS9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 NUS1P3-201ENST00000423502 862 ntBASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 YBX1P6-201ENST00000442962 1002 ntBASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.67□□□□□ -0.22
TMIGD3P0DMS9 RNA5SP412-201ENST00000516234 123 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms