Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.98■□□□□ 0.47
CHGBP05060 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CHGBP05060 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
CHGBP05060 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.98■□□□□ 0.47
CHGBP05060 AC007969.1-201ENST00000433675 447 ntBASIC17.98■□□□□ 0.47
CHGBP05060 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.98■□□□□ 0.47
CHGBP05060 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.98■□□□□ 0.47
CHGBP05060 AC131206.1-201ENST00000538078 1211 ntBASIC17.98■□□□□ 0.47
CHGBP05060 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 AC079316.1-201ENST00000548397 411 ntBASIC17.98■□□□□ 0.47
CHGBP05060 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.98■□□□□ 0.47
CHGBP05060 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.98■□□□□ 0.47
CHGBP05060 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.98■□□□□ 0.47
CHGBP05060 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.98■□□□□ 0.47
CHGBP05060 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.98■□□□□ 0.47
CHGBP05060 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.98■□□□□ 0.47
CHGBP05060 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.98■□□□□ 0.47
CHGBP05060 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.98■□□□□ 0.47
CHGBP05060 AC140479.7-201ENST00000636301 2332 ntBASIC17.98■□□□□ 0.47
CHGBP05060 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CHGBP05060 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHGBP05060 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.98■□□□□ 0.47
CHGBP05060 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHGBP05060 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHGBP05060 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHGBP05060 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.97■□□□□ 0.47
CHGBP05060 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.97■□□□□ 0.47
CHGBP05060 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.97■□□□□ 0.47
CHGBP05060 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CHGBP05060 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 FAM21FP-201ENST00000426241 1131 ntBASIC17.97■□□□□ 0.47
CHGBP05060 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.97■□□□□ 0.47
CHGBP05060 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHGBP05060 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 ZNF767P-206ENST00000513792 565 ntBASIC17.97■□□□□ 0.47
CHGBP05060 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.97■□□□□ 0.47
CHGBP05060 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.97■□□□□ 0.47
CHGBP05060 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.97■□□□□ 0.47
CHGBP05060 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.97■□□□□ 0.47
CHGBP05060 AL096828.3-201ENST00000615354 462 ntBASIC17.97■□□□□ 0.47
CHGBP05060 AP001002.3-201ENST00000623482 206 ntBASIC17.97■□□□□ 0.47
CHGBP05060 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.97■□□□□ 0.47
CHGBP05060 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CHGBP05060 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.97■□□□□ 0.47
CHGBP05060 AC006504.5-208ENST00000588784 2401 ntBASIC17.97■□□□□ 0.47
CHGBP05060 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.97■□□□□ 0.47
CHGBP05060 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHGBP05060 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHGBP05060 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms