Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SPTLC1P5-201ENST00000450718 252 ntBASIC16.39■□□□□ 0.21
VTNP04004 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.39■□□□□ 0.21
VTNP04004 TUBB8P8-201ENST00000458717 1058 ntBASIC16.39■□□□□ 0.21
VTNP04004 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
VTNP04004 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.39■□□□□ 0.21
VTNP04004 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.39■□□□□ 0.21
VTNP04004 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 AC084346.2-201ENST00000607097 949 ntBASIC16.39■□□□□ 0.21
VTNP04004 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.39■□□□□ 0.21
VTNP04004 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VTNP04004 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.39■□□□□ 0.21
VTNP04004 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.39■□□□□ 0.21
VTNP04004 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.39■□□□□ 0.21
VTNP04004 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.39■□□□□ 0.21
VTNP04004 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VTNP04004 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
VTNP04004 FLJ16779-201ENST00000612722 7638 ntBASIC16.38■□□□□ 0.21
VTNP04004 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 AC244394.1-201ENST00000435000 1665 ntBASIC16.38■□□□□ 0.21
VTNP04004 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.38■□□□□ 0.21
VTNP04004 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.38■□□□□ 0.21
VTNP04004 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.38■□□□□ 0.21
VTNP04004 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 AC106794.1-201ENST00000506935 792 ntBASIC16.38■□□□□ 0.21
VTNP04004 AC022217.1-201ENST00000521069 738 ntBASIC16.38■□□□□ 0.21
VTNP04004 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 AC013355.1-201ENST00000562625 723 ntBASIC16.38■□□□□ 0.21
VTNP04004 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.38■□□□□ 0.21
VTNP04004 RN7SL163P-201ENST00000583100 276 ntBASIC16.38■□□□□ 0.21
VTNP04004 AC005324.6-201ENST00000587972 613 ntBASIC16.38■□□□□ 0.21
VTNP04004 AC132192.2-201ENST00000596206 1147 ntBASIC16.38■□□□□ 0.21
VTNP04004 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
VTNP04004 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
VTNP04004 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.38■□□□□ 0.21
VTNP04004 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.38■□□□□ 0.21
VTNP04004 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VTNP04004 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
VTNP04004 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.37■□□□□ 0.21
VTNP04004 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.37■□□□□ 0.21
VTNP04004 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.37■□□□□ 0.21
VTNP04004 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VTNP04004 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VTNP04004 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VTNP04004 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.37■□□□□ 0.21
VTNP04004 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.37■□□□□ 0.21
VTNP04004 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.37■□□□□ 0.21
VTNP04004 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.37■□□□□ 0.21
VTNP04004 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.37■□□□□ 0.21
VTNP04004 RPL18P13-201ENST00000478088 569 ntBASIC16.37■□□□□ 0.21
VTNP04004 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.37■□□□□ 0.21
VTNP04004 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.37■□□□□ 0.21
VTNP04004 AL645939.5-201ENST00000606834 243 ntBASIC16.37■□□□□ 0.21
VTNP04004 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms