Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 ACE3P-201ENST00000423435 1973 ntBASIC13.41□□□□□ -0.26
APOC1P02654 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 KRT18P28-201ENST00000453838 1332 ntBASIC13.41□□□□□ -0.26
APOC1P02654 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 AC007787.1-201ENST00000588095 1583 ntBASIC13.41□□□□□ -0.26
APOC1P02654 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
APOC1P02654 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 REXO1L4P-201ENST00000605109 1937 ntBASIC13.41□□□□□ -0.26
APOC1P02654 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 DMBT1P1-203ENST00000636837 4628 ntBASIC13.41□□□□□ -0.26
APOC1P02654 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
APOC1P02654 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.41□□□□□ -0.26
APOC1P02654 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.41□□□□□ -0.26
APOC1P02654 AL512638.1-201ENST00000457493 794 ntBASIC13.41□□□□□ -0.26
APOC1P02654 RPL13AP25-201ENST00000484130 612 ntBASIC13.41□□□□□ -0.26
APOC1P02654 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.41□□□□□ -0.26
APOC1P02654 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
APOC1P02654 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.41□□□□□ -0.26
APOC1P02654 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 CICP23-201ENST00000605013 2741 ntBASIC13.41□□□□□ -0.26
APOC1P02654 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.41□□□□□ -0.26
APOC1P02654 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
APOC1P02654 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
APOC1P02654 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC1P02654 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
APOC1P02654 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
APOC1P02654 AP000845.1-201ENST00000581677 2131 ntBASIC13.4□□□□□ -0.26
APOC1P02654 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
APOC1P02654 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 AL645937.2-201ENST00000396808 931 ntBASIC13.4□□□□□ -0.26
APOC1P02654 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.4□□□□□ -0.26
APOC1P02654 MEP1AP4-201ENST00000423244 1087 ntBASIC13.4□□□□□ -0.26
APOC1P02654 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.4□□□□□ -0.26
APOC1P02654 AC009477.1-201ENST00000452936 217 ntBASIC13.4□□□□□ -0.26
APOC1P02654 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 AC036164.1-201ENST00000570544 333 ntBASIC13.4□□□□□ -0.26
APOC1P02654 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.4□□□□□ -0.26
APOC1P02654 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 AJ011931.1-201ENST00000618749 2492 ntBASIC13.4□□□□□ -0.26
APOC1P02654 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC1P02654 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms