Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 FAM197Y7-201ENST00000432892 766 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 KRT43P-201ENST00000434019 910 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 C2orf27AP3-201ENST00000434123 579 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 AC007551.1-201ENST00000457394 519 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 RAB43P1-201ENST00000561790 589 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 AC239800.4-201ENST00000603712 296 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 AL512343.1-201ENST00000605837 169 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 AL354718.3-201ENST00000616414 581 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 AL162274.1-201ENST00000617191 1098 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 CR382287.1-201ENST00000623954 586 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
TRBV12-3P01733 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TRBV12-3P01733 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.65□□□□□ -0.55
TRBV12-3P01733 AC013726.1-201ENST00000563747 2285 ntBASIC11.65□□□□□ -0.55
TRBV12-3P01733 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
TRBV12-3P01733 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 AC016694.1-201ENST00000434179 700 ntBASIC11.64□□□□□ -0.55
TRBV12-3P01733 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRBV12-3P01733 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
TRBV12-3P01733 SNX29P1-201ENST00000548357 1007 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms