Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SIX6O95475 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.65□□□□□ -0.39
SIX6O95475 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
SIX6O95475 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.65□□□□□ -0.39
SIX6O95475 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SIX6O95475 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
SIX6O95475 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SIX6O95475 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 AZGP1P1-201ENST00000411909 902 ntBASIC12.64□□□□□ -0.39
SIX6O95475 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.64□□□□□ -0.39
SIX6O95475 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.64□□□□□ -0.39
SIX6O95475 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.64□□□□□ -0.39
SIX6O95475 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.64□□□□□ -0.39
SIX6O95475 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SIX6O95475 OR7E14P-202ENST00000530490 1290 ntBASIC12.64□□□□□ -0.39
SIX6O95475 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.64□□□□□ -0.39
SIX6O95475 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.64□□□□□ -0.39
SIX6O95475 AL138918.1-201ENST00000568306 659 ntBASIC12.64□□□□□ -0.39
SIX6O95475 AL356488.2-201ENST00000602755 427 ntBASIC12.64□□□□□ -0.39
SIX6O95475 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.64□□□□□ -0.39
SIX6O95475 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
SIX6O95475 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.64□□□□□ -0.39
SIX6O95475 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
SIX6O95475 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.64□□□□□ -0.39
SIX6O95475 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SIX6O95475 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
SIX6O95475 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.64□□□□□ -0.39
SIX6O95475 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SIX6O95475 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
SIX6O95475 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms