Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 HLA-K-203ENST00000430151 1046 ntBASIC15.13■□□□□ 0.01
RFPL1O75677 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RFPL1O75677 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.13■□□□□ 0.01
RFPL1O75677 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.13■□□□□ 0.01
RFPL1O75677 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.13■□□□□ 0.01
RFPL1O75677 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RFPL1O75677 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RFPL1O75677 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.13■□□□□ 0.01
RFPL1O75677 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RFPL1O75677 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.13■□□□□ 0.01
RFPL1O75677 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.13■□□□□ 0.01
RFPL1O75677 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RFPL1O75677 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.13■□□□□ 0.01
RFPL1O75677 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.12■□□□□ 0.01
RFPL1O75677 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.12■□□□□ 0.01
RFPL1O75677 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.12■□□□□ 0.01
RFPL1O75677 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RFPL1O75677 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.12■□□□□ 0.01
RFPL1O75677 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RFPL1O75677 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 AC004461.2-201ENST00000629517 803 ntBASIC15.12■□□□□ 0.01
RFPL1O75677 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RFPL1O75677 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RFPL1O75677 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 AL137783.1-201ENST00000623494 1896 ntBASIC15.12■□□□□ 0.01
RFPL1O75677 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFPL1O75677 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFPL1O75677 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.11■□□□□ 0.01
RFPL1O75677 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.11■□□□□ 0.01
RFPL1O75677 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms