Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.12□□□□□ -0.15
TRIM3O75382 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRIM3O75382 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 AC106886.1-201ENST00000568660 600 ntBASIC14.12□□□□□ -0.15
TRIM3O75382 MIR5189-201ENST00000577370 114 ntBASIC14.12□□□□□ -0.15
TRIM3O75382 CLUHP6-201ENST00000580789 941 ntBASIC14.12□□□□□ -0.15
TRIM3O75382 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 AC008735.3-201ENST00000596646 500 ntBASIC14.12□□□□□ -0.15
TRIM3O75382 AL162274.1-201ENST00000617191 1098 ntBASIC14.12□□□□□ -0.15
TRIM3O75382 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM3O75382 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM3O75382 C18orf15-201ENST00000623680 2534 ntBASIC14.12□□□□□ -0.15
TRIM3O75382 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM3O75382 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 AC009090.5-201ENST00000624886 2285 ntBASIC14.11□□□□□ -0.15
TRIM3O75382 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRIM3O75382 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIM3O75382 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIM3O75382 AC005252.2-201ENST00000624630 1141 ntBASIC14.11□□□□□ -0.15
TRIM3O75382 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM3O75382 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM3O75382 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM3O75382 AC112693.3-201ENST00000624819 1983 ntBASIC14.11□□□□□ -0.15
TRIM3O75382 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms