Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CYTIPO60759 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.48□□□□□ -0.25
CYTIPO60759 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CYTIPO60759 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CYTIPO60759 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CYTIPO60759 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CYTIPO60759 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CYTIPO60759 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CYTIPO60759 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.48□□□□□ -0.25
CYTIPO60759 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.47□□□□□ -0.25
CYTIPO60759 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 TPM3P8-201ENST00000330554 643 ntBASIC13.47□□□□□ -0.25
CYTIPO60759 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 MIR1909-201ENST00000411312 80 ntBASIC13.47□□□□□ -0.25
CYTIPO60759 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.47□□□□□ -0.25
CYTIPO60759 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.47□□□□□ -0.25
CYTIPO60759 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.47□□□□□ -0.25
CYTIPO60759 AC104989.1-201ENST00000519711 778 ntBASIC13.47□□□□□ -0.25
CYTIPO60759 IGHV3-71-201ENST00000523324 359 ntBASIC13.47□□□□□ -0.25
CYTIPO60759 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.47□□□□□ -0.25
CYTIPO60759 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.47□□□□□ -0.25
CYTIPO60759 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.47□□□□□ -0.25
CYTIPO60759 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.47□□□□□ -0.25
CYTIPO60759 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.47□□□□□ -0.25
CYTIPO60759 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYTIPO60759 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.46□□□□□ -0.25
CYTIPO60759 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CYTIPO60759 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
CYTIPO60759 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CYTIPO60759 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.46□□□□□ -0.25
CYTIPO60759 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CYTIPO60759 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYTIPO60759 CD8B2-202ENST00000417670 633 ntBASIC13.46□□□□□ -0.25
CYTIPO60759 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.46□□□□□ -0.25
CYTIPO60759 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.46□□□□□ -0.25
CYTIPO60759 FAM197Y7-201ENST00000432892 766 ntBASIC13.46□□□□□ -0.25
CYTIPO60759 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
CYTIPO60759 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms