Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 HLA-K-203ENST00000430151 1046 ntBASIC13.15□□□□□ -0.3
XRCC2O43543 UGT1A2P-201ENST00000454886 866 ntBASIC13.15□□□□□ -0.3
XRCC2O43543 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.15□□□□□ -0.3
XRCC2O43543 AC092552.1-201ENST00000547243 906 ntBASIC13.15□□□□□ -0.3
XRCC2O43543 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.15□□□□□ -0.3
XRCC2O43543 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.15□□□□□ -0.3
XRCC2O43543 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.15□□□□□ -0.3
XRCC2O43543 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.15□□□□□ -0.3
XRCC2O43543 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 AL603764.1-201ENST00000636452 321 ntBASIC13.15□□□□□ -0.3
XRCC2O43543 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 AC007541.1-201ENST00000570282 1469 ntBASIC13.15□□□□□ -0.3
XRCC2O43543 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.15□□□□□ -0.31
XRCC2O43543 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
XRCC2O43543 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
XRCC2O43543 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.15□□□□□ -0.31
XRCC2O43543 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.15□□□□□ -0.31
XRCC2O43543 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
XRCC2O43543 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
XRCC2O43543 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.14□□□□□ -0.31
XRCC2O43543 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 AL139094.1-201ENST00000405549 1188 ntBASIC13.14□□□□□ -0.31
XRCC2O43543 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.14□□□□□ -0.31
XRCC2O43543 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 AC124283.3-201ENST00000570869 594 ntBASIC13.14□□□□□ -0.31
XRCC2O43543 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.14□□□□□ -0.31
XRCC2O43543 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 AC133539.2-201ENST00000604757 467 ntBASIC13.14□□□□□ -0.31
XRCC2O43543 TMEM261P1-201ENST00000604899 340 ntBASIC13.14□□□□□ -0.31
XRCC2O43543 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.14□□□□□ -0.31
XRCC2O43543 AC008761.3-201ENST00000624803 892 ntBASIC13.14□□□□□ -0.31
XRCC2O43543 PRSS30P-206ENST00000641773 873 ntBASIC13.14□□□□□ -0.31
XRCC2O43543 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
XRCC2O43543 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
XRCC2O43543 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.14□□□□□ -0.31
XRCC2O43543 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
XRCC2O43543 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.14□□□□□ -0.31
XRCC2O43543 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
XRCC2O43543 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
XRCC2O43543 KRT8P14-201ENST00000414254 1442 ntBASIC13.13□□□□□ -0.31
XRCC2O43543 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
XRCC2O43543 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
XRCC2O43543 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
XRCC2O43543 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
XRCC2O43543 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms