Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AL358472.5-202ENST00000641448 1267 ntBASIC13.27□□□□□ -0.29
NPIPB4C9JG80 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AC011840.2-201ENST00000563063 1520 ntBASIC13.27□□□□□ -0.29
NPIPB4C9JG80 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AC152010.1-201ENST00000415779 2006 ntBASIC13.27□□□□□ -0.29
NPIPB4C9JG80 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 AC103988.2-201ENST00000561804 725 ntBASIC13.26□□□□□ -0.29
NPIPB4C9JG80 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 GNRHR2-203ENST00000581100 1187 ntBASIC13.26□□□□□ -0.29
NPIPB4C9JG80 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 AC025048.6-201ENST00000634326 1161 ntBASIC13.26□□□□□ -0.29
NPIPB4C9JG80 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 INTS4P1-203ENST00000641008 3683 ntBASIC13.26□□□□□ -0.29
NPIPB4C9JG80 AC007686.3-201ENST00000619017 3487 ntBASIC13.26□□□□□ -0.29
NPIPB4C9JG80 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPB4C9JG80 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 AL590440.2-201ENST00000641973 1595 ntBASIC13.25□□□□□ -0.29
NPIPB4C9JG80 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms