Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 AL035456.1-201ENST00000456064 1369 ntBASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TCRBV3S1A0A5B6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TCRBV3S1A0A5B6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TCRBV3S1A0A5B6 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AC004870.1-201ENST00000315132 882 ntBASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AL079307.3-201ENST00000556114 283 ntBASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 MIR6074-201ENST00000612054 107 ntBASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AC007967.4-201ENST00000614700 386 ntBASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRBV3S1A0A5B6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 RN7SL510P-201ENST00000581311 263 ntBASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 SLC25A6P4-201ENST00000586535 553 ntBASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 AGAP10P-201ENST00000454844 2418 ntBASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms