Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC113367.3-201ENST00000508316 1912 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 KRT18P13-201ENST00000400056 1290 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 RN7SL618P-201ENST00000477850 296 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC125807.1-201ENST00000483097 614 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 HLA-J-203ENST00000494367 1087 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 TEX28P1-201ENST00000613479 1221 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 TEX28P2-201ENST00000617764 1221 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 Z92544.3-201ENST00000624747 417 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC015922.1-201ENST00000421102 1152 ntBASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 AL512361.1-201ENST00000554200 418 ntBASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 AL138828.2-201ENST00000615812 383 ntBASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RNF103-CHMP3A0A140T963 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF103-CHMP3A0A140T963 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms