Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 USB1-207ENST00000563149 1751 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 AGAP12P-201ENST00000585227 2359 ntBASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 KRT18P14-201ENST00000534205 1250 ntBASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 AL160237.2-201ENST00000556165 472 ntBASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 AC004263.2-201ENST00000617183 678 ntBASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 AP003969.2-201ENST00000623739 2275 ntBASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 AC096733.2-201ENST00000609937 1394 ntBASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 HERC2P9-206ENST00000529624 5187 ntBASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC7.69□□□□□ -1.18
LINC01558Q9Y6Z2 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 TP73-AS1-210ENST00000637775 1455 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms