Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AL137783.1-201ENST00000623494 1896 ntBASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC026954.1-201ENST00000429771 1293 ntBASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC022616.1-201ENST00000518688 554 ntBASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC078819.1-201ENST00000547454 765 ntBASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC012085.1-201ENST00000548270 765 ntBASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC138951.2-201ENST00000623455 1161 ntBASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AC007292.2-201ENST00000593524 1812 ntBASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AL590640.2-201ENST00000457038 527 ntBASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 AL603764.1-201ENST00000636452 321 ntBASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A3BPQ9Y5P4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.83■□□□□ 0.29
COL4A3BPQ9Y5P4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A3BPQ9Y5P4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A3BPQ9Y5P4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A3BPQ9Y5P4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A3BPQ9Y5P4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A3BPQ9Y5P4 AC006001.1-201ENST00000325130 474 ntBASIC16.83■□□□□ 0.28
COL4A3BPQ9Y5P4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL4A3BPQ9Y5P4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL4A3BPQ9Y5P4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms