Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB7Q9Y5E2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB7Q9Y5E2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 PDIA3P2-201ENST00000428073 158 ntBASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 ALG3P1-201ENST00000508806 1114 ntBASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 Z98259.2-201ENST00000641583 609 ntBASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 FAM90A7P-201ENST00000382628 1395 ntBASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 FAM90A23P-201ENST00000400136 1395 ntBASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB7Q9Y5E2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 IGLV3-15-201ENST00000518356 244 ntBASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 POU5F1P2-201ENST00000521750 823 ntBASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 AC103988.2-201ENST00000561804 725 ntBASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 BX088702.1-201ENST00000610784 235 ntBASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 MIR6727-201ENST00000620702 65 ntBASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB7Q9Y5E2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms