Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 EMBP1-201ENST00000458200 901 ntBASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 AC079776.4-201ENST00000511039 504 ntBASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 IGHV3-22-201ENST00000520721 359 ntBASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 AP000842.3-202ENST00000569238 1080 ntBASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 AL773604.1-201ENST00000617417 272 ntBASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 AC004899.2-201ENST00000622993 3860 ntBASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 TFAMP1-201ENST00000412727 736 ntBASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AL355306.1-201ENST00000415580 579 ntBASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AL031284.1-201ENST00000419297 478 ntBASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 HIST3H2BA-201ENST00000436555 524 ntBASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 TARDBPP1-201ENST00000442013 1203 ntBASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AC064836.3-201ENST00000607928 673 ntBASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 KRT8P24-201ENST00000560290 1559 ntBASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms