Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 AL355864.2-201ENST00000447420 863 ntBASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 AP005482.1-201ENST00000563722 1273 ntBASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 BTNL10-201ENST00000595971 695 ntBASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 AC233724.13-201ENST00000598383 410 ntBASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RPH3AQ9Y2J0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
RPH3AQ9Y2J0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RPH3AQ9Y2J0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
RPH3AQ9Y2J0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 RNU1-114P-201ENST00000365297 166 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 AC092933.1-201ENST00000393644 945 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 CROCCP4-201ENST00000457096 498 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 USP32P1-208ENST00000506594 1164 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 KRT18P25-201ENST00000508931 1278 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms