Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AC138969.2-201ENST00000532739 9932 ntBASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 Z97205.2-201ENST00000564697 1639 ntBASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 MTHFR-210ENST00000641407 2387 ntBASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AC092183.1-201ENST00000469884 875 ntBASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 TIMM17BP1-201ENST00000545713 516 ntBASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AL590560.3-201ENST00000623350 461 ntBASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 ST20-AS1-201ENST00000560255 4223 ntBASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC100757.3-201ENST00000622361 1406 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AP001267.2-201ENST00000532619 2086 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC092580.3-201ENST00000430932 139 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC055876.3-201ENST00000431496 288 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms