Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 HNRNPA3P12-201ENST00000437410 1063 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 RN7SL111P-201ENST00000468841 285 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC020917.1-201ENST00000494084 893 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC012572.1-201ENST00000581634 397 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 MIR4309-201ENST00000582498 83 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 KRT8P38-201ENST00000441370 1430 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC009113.1-201ENST00000570267 2443 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 RPL3P9-201ENST00000463217 1183 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC087203.1-201ENST00000532111 1181 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC034205.3-201ENST00000603595 1376 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 HLA-DQB3-203ENST00000425319 356 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AL512288.2-201ENST00000426041 367 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 DNM1P17-201ENST00000512082 426 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AL133467.4-201ENST00000602953 725 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 LILRP2-202ENST00000413572 1383 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 PHBP10-201ENST00000416467 784 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC022483.2-201ENST00000461464 555 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC013472.3-201ENST00000607407 659 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AC092535.4-201ENST00000609548 397 ntBASIC5.88□□□□□ -1.47
MACF1Q9UPN3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
MACF1Q9UPN3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms