Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 MIR4750-201ENST00000584564 56 ntBASIC17.26■□□□□ 0.35
PNMA3Q9UL41 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PNMA3Q9UL41 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 REXO1L4P-201ENST00000605109 1937 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 AL138725.1-201ENST00000407347 1314 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 TBC1D3J-201ENST00000620719 1426 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 RN7SKP230-201ENST00000365642 335 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 AC239868.1-201ENST00000369385 493 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 AC073150.1-201ENST00000450406 1084 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 RN7SL555P-201ENST00000584742 339 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 AC011491.1-203ENST00000637688 543 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 FAM90A7P-201ENST00000382628 1395 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 FAM90A23P-201ENST00000400136 1395 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 MBLAC2-202ENST00000514906 1936 ntBASIC17.25■□□□□ 0.35
PNMA3Q9UL41 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PNMA3Q9UL41 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 NFIC-211ENST00000641145 8399 ntBASIC17.24■□□□□ 0.35
PNMA3Q9UL41 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 RN7SL181P-201ENST00000462921 277 ntBASIC17.24■□□□□ 0.35
PNMA3Q9UL41 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 AC073352.2-201ENST00000609385 439 ntBASIC17.24■□□□□ 0.35
PNMA3Q9UL41 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms