Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 FGD5P1-202ENST00000614866 2498 ntBASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 AC106760.1-201ENST00000508690 800 ntBASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 HILS1-202ENST00000545329 423 ntBASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 GNRHR2-203ENST00000581100 1187 ntBASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 AC233724.13-201ENST00000598383 410 ntBASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCMF1Q9P0J7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 CICP24-201ENST00000605464 2705 ntBASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 LINC01101-201ENST00000622953 1884 ntBASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 KRT17P8-201ENST00000540749 863 ntBASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AL162274.1-201ENST00000617191 1098 ntBASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms