Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 YBX1P6-201ENST00000442962 1002 ntBASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM248Q9NWD8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 AC007292.2-201ENST00000593524 1812 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 AP002414.2-201ENST00000591780 3365 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 HOMER2P2-201ENST00000451621 847 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 BNIP3P42-201ENST00000454982 569 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 RNA5SP412-201ENST00000516234 123 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 PPY2P-201ENST00000582808 702 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 BNIP3P29-201ENST00000598302 571 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 BX088702.1-201ENST00000610784 235 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 AC011447.5-201ENST00000616168 564 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 AC103702.1-201ENST00000548801 2630 ntBASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms