Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRMT13Q9NUP7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 PKD1P5-201ENST00000532415 10291 ntBASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AL513523.2-202ENST00000427283 2040 ntBASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AL157407.1-201ENST00000435784 904 ntBASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AC103810.10-201ENST00000606504 343 ntBASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 MIR6842-201ENST00000612539 65 ntBASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 YRDCP1-201ENST00000621419 643 ntBASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AC027601.3-201ENST00000622907 509 ntBASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 AC023090.2-201ENST00000625182 2110 ntBASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRMT13Q9NUP7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 RN7SL8P-201ENST00000461771 266 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 RN7SL258P-201ENST00000478664 300 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 AC006122.1-201ENST00000493323 440 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 AC144522.1-201ENST00000625111 1658 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 FAM90A2P-201ENST00000511144 1395 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 FAM90A25P-201ENST00000528404 1395 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 AL162727.3-201ENST00000635661 2787 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 SALL4P5-201ENST00000419001 1760 ntBASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.36■□□□□ 0.21
TRMT13Q9NUP7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRMT13Q9NUP7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRMT13Q9NUP7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRMT13Q9NUP7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRMT13Q9NUP7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.35■□□□□ 0.21
TRMT13Q9NUP7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms