Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SP110Q9HB58 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.46■□□□□ 0.07
SP110Q9HB58 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.46■□□□□ 0.07
SP110Q9HB58 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.46■□□□□ 0.07
SP110Q9HB58 C2orf27AP3-201ENST00000434123 579 ntBASIC15.46■□□□□ 0.07
SP110Q9HB58 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.46■□□□□ 0.07
SP110Q9HB58 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.46■□□□□ 0.07
SP110Q9HB58 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.46■□□□□ 0.07
SP110Q9HB58 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.46■□□□□ 0.07
SP110Q9HB58 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.46■□□□□ 0.07
SP110Q9HB58 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SP110Q9HB58 AC026434.2-201ENST00000506094 1078 ntBASIC15.46■□□□□ 0.07
SP110Q9HB58 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SP110Q9HB58 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.46■□□□□ 0.07
SP110Q9HB58 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.46■□□□□ 0.07
SP110Q9HB58 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.46■□□□□ 0.07
SP110Q9HB58 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.46■□□□□ 0.07
SP110Q9HB58 AL354718.3-201ENST00000616414 581 ntBASIC15.46■□□□□ 0.07
SP110Q9HB58 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SP110Q9HB58 CR382287.1-201ENST00000623954 586 ntBASIC15.46■□□□□ 0.07
SP110Q9HB58 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SP110Q9HB58 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SP110Q9HB58 SBF1P1-201ENST00000444527 5631 ntBASIC15.46■□□□□ 0.07
SP110Q9HB58 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SP110Q9HB58 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.46■□□□□ 0.07
SP110Q9HB58 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SP110Q9HB58 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
SP110Q9HB58 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SP110Q9HB58 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.46■□□□□ 0.06
SP110Q9HB58 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
SP110Q9HB58 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.46■□□□□ 0.06
SP110Q9HB58 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
SP110Q9HB58 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SP110Q9HB58 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.46■□□□□ 0.06
SP110Q9HB58 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.46■□□□□ 0.06
SP110Q9HB58 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.46■□□□□ 0.06
SP110Q9HB58 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SP110Q9HB58 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SP110Q9HB58 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SP110Q9HB58 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
SP110Q9HB58 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.45■□□□□ 0.06
SP110Q9HB58 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.45■□□□□ 0.06
SP110Q9HB58 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SP110Q9HB58 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.45■□□□□ 0.06
SP110Q9HB58 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.45■□□□□ 0.06
SP110Q9HB58 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.45■□□□□ 0.06
SP110Q9HB58 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.45■□□□□ 0.06
SP110Q9HB58 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.45■□□□□ 0.06
SP110Q9HB58 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.45■□□□□ 0.06
SP110Q9HB58 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SP110Q9HB58 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SP110Q9HB58 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SP110Q9HB58 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.45■□□□□ 0.06
SP110Q9HB58 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SP110Q9HB58 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.45■□□□□ 0.06
SP110Q9HB58 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SP110Q9HB58 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.44■□□□□ 0.06
SP110Q9HB58 AC063926.2-201ENST00000623766 1308 ntBASIC15.44■□□□□ 0.06
SP110Q9HB58 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SP110Q9HB58 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SP110Q9HB58 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
SP110Q9HB58 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SP110Q9HB58 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.44■□□□□ 0.06
SP110Q9HB58 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SP110Q9HB58 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.44■□□□□ 0.06
SP110Q9HB58 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.44■□□□□ 0.06
SP110Q9HB58 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
SP110Q9HB58 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SP110Q9HB58 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms