Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 AL121723.1-201ENST00000445194 1519 ntBASIC18.57■□□□□ 0.56
UPF2Q9HAU5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 AL079307.3-201ENST00000556114 283 ntBASIC18.56■□□□□ 0.56
UPF2Q9HAU5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF2Q9HAU5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SLC25A1P1-201ENST00000528351 927 ntBASIC18.55■□□□□ 0.56
UPF2Q9HAU5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 BX640515.1-201ENST00000617215 977 ntBASIC18.55■□□□□ 0.56
UPF2Q9HAU5 LINC00628-201ENST00000628516 1289 ntBASIC18.55■□□□□ 0.56
UPF2Q9HAU5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
UPF2Q9HAU5 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms