Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 C2orf69P2-201ENST00000562032 1123 ntBASIC17.72■□□□□ 0.43
RNF41Q9H4P4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AC018442.1-201ENST00000421439 2061 ntBASIC17.71■□□□□ 0.43
RNF41Q9H4P4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 FGD5P1-202ENST00000614866 2498 ntBASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 RN7SKP175-201ENST00000408472 289 ntBASIC17.71■□□□□ 0.43
RNF41Q9H4P4 FAM21FP-201ENST00000426241 1131 ntBASIC17.71■□□□□ 0.43
RNF41Q9H4P4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AP003171.2-201ENST00000528208 925 ntBASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 DUX4L45-201ENST00000566406 1057 ntBASIC17.71■□□□□ 0.43
RNF41Q9H4P4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AL008721.1-201ENST00000609964 604 ntBASIC17.71■□□□□ 0.43
RNF41Q9H4P4 ZACNP1-201ENST00000612259 710 ntBASIC17.71■□□□□ 0.43
RNF41Q9H4P4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF41Q9H4P4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF41Q9H4P4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF41Q9H4P4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RNF41Q9H4P4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.71■□□□□ 0.42
RNF41Q9H4P4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 AC004945.1-201ENST00000416738 983 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms