Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 RNA5SP410-201ENST00000516285 106 ntBASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 AC105339.3-201ENST00000560043 636 ntBASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 AC008735.5-201ENST00000623544 497 ntBASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 AC118758.2-201ENST00000614242 2813 ntBASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 AL365181.3-201ENST00000605886 3222 ntBASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SMIM3Q9BZL3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AC083964.2-201ENST00000623988 2396 ntBASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 ATP5G2P1-201ENST00000433580 426 ntBASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.37□□□□□ -0.43
SMIM3Q9BZL3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms