Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PKD1P1-201ENST00000458669 6805 ntBASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL25A1Q9BXS0 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 U73169.1-201ENST00000395152 367 ntBASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 FAM21EP-201ENST00000417804 985 ntBASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 CRIP1P2-201ENST00000425396 228 ntBASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 ABCD1P3-201ENST00000562927 605 ntBASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 SNORD3B-1-201ENST00000577988 758 ntBASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 PSME3-213ENST00000592169 826 ntTSL 3 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
COL25A1Q9BXS0 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 LILRP2-202ENST00000413572 1383 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AC112504.1-201ENST00000623415 1841 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 MTATP6P19-201ENST00000413797 659 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 CCND3P1-201ENST00000438347 580 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 RNU1-80P-201ENST00000459500 161 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 ALDOAP1-201ENST00000491506 1078 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 ALG1L7P-201ENST00000502317 768 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 GRAMD4P6-201ENST00000556999 244 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AC005777.1-201ENST00000588332 187 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 MIR7848-201ENST00000617402 101 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 AL157414.3-201ENST00000624276 1954 ntBASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms