Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 MKNK2P1-201ENST00000437526 628 ntBASIC14.71□□□□□ -0.05
EBF4Q9BQW3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 MIR4453-201ENST00000584019 89 ntBASIC14.71□□□□□ -0.05
EBF4Q9BQW3 AC120114.3-201ENST00000611923 658 ntBASIC14.71□□□□□ -0.05
EBF4Q9BQW3 BX640515.1-201ENST00000617215 977 ntBASIC14.71□□□□□ -0.05
EBF4Q9BQW3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.71□□□□□ -0.06
EBF4Q9BQW3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
EBF4Q9BQW3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
EBF4Q9BQW3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
EBF4Q9BQW3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
EBF4Q9BQW3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
EBF4Q9BQW3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
EBF4Q9BQW3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
EBF4Q9BQW3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AL627223.1-201ENST00000416693 442 ntBASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 TMEM198B-204ENST00000484016 896 ntBASIC14.7□□□□□ -0.06
EBF4Q9BQW3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AC040169.1-201ENST00000565382 521 ntBASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AL589739.1-201ENST00000607720 493 ntBASIC14.7□□□□□ -0.06
EBF4Q9BQW3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 AC005562.1-201ENST00000583030 3219 ntBASIC14.7□□□□□ -0.06
EBF4Q9BQW3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EBF4Q9BQW3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
EBF4Q9BQW3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms