Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 WASH4P-201ENST00000564273 1246 ntBASIC14.09□□□□□ -0.15
TM9SF2Q99805 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 CLK3P2-201ENST00000427566 1453 ntBASIC14.09□□□□□ -0.15
TM9SF2Q99805 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 AC067750.1-201ENST00000608826 6545 ntBASIC14.09□□□□□ -0.15
TM9SF2Q99805 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF2Q99805 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
TM9SF2Q99805 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TM9SF2Q99805 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TM9SF2Q99805 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TM9SF2Q99805 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TM9SF2Q99805 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
TM9SF2Q99805 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 ST20-AS1-201ENST00000560255 4223 ntBASIC14.08□□□□□ -0.16
TM9SF2Q99805 AC041040.2-201ENST00000622926 2899 ntBASIC14.08□□□□□ -0.16
TM9SF2Q99805 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 TOMM22P5-201ENST00000416399 439 ntBASIC14.08□□□□□ -0.16
TM9SF2Q99805 AC136604.1-201ENST00000418535 575 ntBASIC14.08□□□□□ -0.16
TM9SF2Q99805 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 ELK1P1-201ENST00000485699 580 ntBASIC14.08□□□□□ -0.16
TM9SF2Q99805 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 GIMAP3P-201ENST00000495150 836 ntBASIC14.08□□□□□ -0.16
TM9SF2Q99805 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 MIR4313-201ENST00000580760 101 ntBASIC14.08□□□□□ -0.16
TM9SF2Q99805 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
TM9SF2Q99805 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF2Q99805 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF2Q99805 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.07□□□□□ -0.16
TM9SF2Q99805 AL158212.4-201ENST00000624062 1286 ntBASIC14.07□□□□□ -0.16
TM9SF2Q99805 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms