Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF34Q969K3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF34Q969K3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF34Q969K3 KRT17P8-201ENST00000540749 863 ntBASIC15.81■□□□□ 0.12
RNF34Q969K3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF34Q969K3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF34Q969K3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF34Q969K3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF34Q969K3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF34Q969K3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RNF34Q969K3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF34Q969K3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF34Q969K3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF34Q969K3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF34Q969K3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF34Q969K3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF34Q969K3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF34Q969K3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF34Q969K3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF34Q969K3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF34Q969K3 AC055811.4-201ENST00000624039 1754 ntBASIC15.8■□□□□ 0.12
RNF34Q969K3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF34Q969K3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF34Q969K3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF34Q969K3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF34Q969K3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF34Q969K3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RNF34Q969K3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF34Q969K3 AC234783.1-201ENST00000441761 496 ntBASIC15.8■□□□□ 0.12
RNF34Q969K3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF34Q969K3 RAB43P1-201ENST00000561790 589 ntBASIC15.8■□□□□ 0.12
RNF34Q969K3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF34Q969K3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF34Q969K3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF34Q969K3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF34Q969K3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RNF34Q969K3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF34Q969K3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF34Q969K3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF34Q969K3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF34Q969K3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RNF34Q969K3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.79■□□□□ 0.12
RNF34Q969K3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 OR8S1-201ENST00000310194 1080 ntBASIC15.79■□□□□ 0.12
RNF34Q969K3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF34Q969K3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.79■□□□□ 0.12
RNF34Q969K3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.79■□□□□ 0.12
RNF34Q969K3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF34Q969K3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF34Q969K3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.79■□□□□ 0.12
RNF34Q969K3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RNF34Q969K3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF34Q969K3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms